Kuan-Hao Chao

Speaking

Talks & posters

Conference talks, invited lectures, and posters on machine learning for genomics.

2026

Predicting dynamic expression patterns in budding yeast with a fungal DNA language model

[ProbGen 2026] Probabilistic Modeling in Genomics 2026 University of California, Berkeley · Berkeley, CA Talk

Slides

2025

Doctoral Dissertation Defense Seminar: \"Decoding the Language of Genomes: Bridging Sequences and Function through Deep Learning\"

Johns Hopkins University · Baltimore, MD Talk

Link

Teaching machines to learn biology: splice site prediction and gene expression prediction

[HPC 2025] JHU Symposium on High-Performance Computing 2025 Johns Hopkins University · Baltimore, MD Talk

Slides

Unifying ChIP-exo DNA-Binding and RNA-Seq Coverage Predictions with a Multi-Species Fungal Language Model

[JHU 2025] JHU Joint Biostats-Genomics Lab Meeting 2025 Johns Hopkins University · Baltimore, MD Talk

Slides Video

2024

[BioData 2024] Biological Data Science 2024

Biological Data Science (BioData 2024) · Cold Spring Harbor, NY Poster

Slides

Improving CHiP-exo DNA-binding and gene expression predictions with a multi-species fungi language model

[Calico project showcase 2024] Calico summer internship talk 2024 Calico Life Sciences · South San Francisco, CA Talk

Slides

[Google Deep Dive 2024] Invited Google Deep Dive Talk 2024

Google Health Deep Dive · Virtual & Mountain View, CA Invited talk

Slides

[ISMB 2024] Intelligent Systems for Molecular Biology 2024

Intelligent Systems for Molecular Biology (ISMB 2024) · Montréal, Canada Poster

Slides

Combining DNA and protein alignments to improve genome annotation with LiftOn

[ISMB 2024] Intelligent Systems for Molecular Biology 2024 Intelligent Systems for Molecular Biology (ISMB 2024) · Montréal, Canada Talk

Slides Video

Predicting Splice Sites in DNA Sequences with Sequence Models

[JHU 2024] JHU Joint Biostats-Genomics Lab Meeting 2024 JHU Joint Biostats-Genomics Lab Meeting (JHU 2024) · Baltimore, MD Talk

Slides Video

[RECOMB 2024] Research on Computational Molecular Biology 2024

Research on Computational Molecular Biology (RECOMB 2024) · Boston, MA Poster

Slides

Combining DNA and protein alignments to improve genome annotation with LiftOn

[RECOMB-Seq 2024] Research on Computational Molecular Biology on Biological Sequence Analysis 2024 Research in Computational Molecular Biology Conference on Biological Sequence Analysis (RECOMB-Seq 2024) · Cambridge, MA Talk

Slides

2023

[GI 2023] Genome Informatics 2023

Genome Informatics (GI 2023) · Cold Spring Harbor, New York Poster

Slides

[ISMB/ECCB 2023] Intelligent Systems for Molecular Biology / European Conference on Computational Biology 2023

Intelligent Systems for Molecular Biology / European Conference on Computational Biology (ISMB/ECCB 2023) · Lyon, France Poster

Slides

[RECOMB 2023] Research on Computational Molecular Biology 2023

Research in Computational Molecular Biology Conference (RECOMB 2023) · Istanbul, Türkiye Poster

Slides

WGT: Tools and algorithms for recognizing, visualizing and generating Wheeler graphs

[RECOMB-Seq 2023] Research on Computational Molecular Biology on Biological Sequence Analysis 2023 Research in Computational Molecular Biology Conference on Biological Sequence Analysis (RECOMB-Seq 2023) · Istanbul, Türkiye Talk

Slides Video

2022

[BDS 2022] Biological Data Science 2022

Biological Data Science (BDS 2022) · Cold Spring Harbor, New York Poster

Slides Video

2021

[Bioc 2021] Bioconductor Conference 2021

Bioconductor Conference 2021 (Bioc 2021) · Virtual Poster

Slides

2019

RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

[ICIBM 2019] International Conference on Intelligent Biology and Medicine 2019 International Conference on Intelligent Biology and Medicine (ICIBM 2019) · Columbus, Ohio Talk

Slides

2018

RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

[NTUCGM 2018] Summer Research Competition 2018 NTU Centers of Genomics and Precision Medicine (NTUCGM) Summer Research · Taipei, Taiwan Talk

2017

[WCIT 2017] Exhibition on smart transportation with Taipei City Government

World Congress on Information Technology (WCIT 2017) · Taipei, Taiwan Exhibition

Slides Video