Kuan-Hao Chao

Speaking

Talks & posters

Conference talks, invited lectures, and posters on machine learning for genomics.

  1. Predicting dynamic expression patterns in budding yeast with a fungal DNA language model

    [ProbGen 2026] Probabilistic Modeling in Genomics 2026University of California, Berkeley· Berkeley, CATalk

    Slides

  2. Doctoral Dissertation Defense Seminar: \"Decoding the Language of Genomes: Bridging Sequences and Function through Deep Learning\"

    Johns Hopkins University· Baltimore, MDTalk

    Link

  3. Teaching machines to learn biology: splice site prediction and gene expression prediction

    [HPC 2025] JHU Symposium on High-Performance Computing 2025Johns Hopkins University· Baltimore, MDTalk

    Slides

  4. Unifying ChIP-exo DNA-Binding and RNA-Seq Coverage Predictions with a Multi-Species Fungal Language Model

    [JHU 2025] JHU Joint Biostats-Genomics Lab Meeting 2025Johns Hopkins University· Baltimore, MDTalk

    SlidesVideo

  5. [BioData 2024] Biological Data Science 2024

    Biological Data Science (BioData 2024)· Cold Spring Harbor, NYPoster

    Slides

  6. Improving CHiP-exo DNA-binding and gene expression predictions with a multi-species fungi language model

    [Calico project showcase 2024] Calico summer internship talk 2024Calico Life Sciences· South San Francisco, CATalk

    Slides

  7. [Google Deep Dive 2024] Invited Google Deep Dive Talk 2024

    Google Health Deep Dive· Virtual & Mountain View, CAInvited talk

    Slides

  8. Combining DNA and protein alignments to improve genome annotation with LiftOn

    [ISMB 2024] Intelligent Systems for Molecular Biology 2024Intelligent Systems for Molecular Biology (ISMB 2024)· Montréal, CanadaTalk

    SlidesVideo

  9. [ISMB 2024] Intelligent Systems for Molecular Biology 2024

    Intelligent Systems for Molecular Biology (ISMB 2024)· Montréal, CanadaPoster

    Slides

  10. Predicting Splice Sites in DNA Sequences with Sequence Models

    [JHU 2024] JHU Joint Biostats-Genomics Lab Meeting 2024JHU Joint Biostats-Genomics Lab Meeting (JHU 2024)· Baltimore, MDTalk

    SlidesVideo

  11. [RECOMB 2024] Research on Computational Molecular Biology 2024

    Research on Computational Molecular Biology (RECOMB 2024)· Boston, MAPoster

    Slides

  12. Combining DNA and protein alignments to improve genome annotation with LiftOn

    [RECOMB-Seq 2024] Research on Computational Molecular Biology on Biological Sequence Analysis 2024Research in Computational Molecular Biology Conference on Biological Sequence Analysis (RECOMB-Seq 2024)· Cambridge, MATalk

    Slides

  13. [GI 2023] Genome Informatics 2023

    Genome Informatics (GI 2023)· Cold Spring Harbor, New YorkPoster

    Slides

  14. [ISMB/ECCB 2023] Intelligent Systems for Molecular Biology / European Conference on Computational Biology 2023

    Intelligent Systems for Molecular Biology / European Conference on Computational Biology (ISMB/ECCB 2023)· Lyon, FrancePoster

    Slides

  15. [RECOMB 2023] Research on Computational Molecular Biology 2023

    Research in Computational Molecular Biology Conference (RECOMB 2023)· Istanbul, TürkiyePoster

    Slides

  16. WGT: Tools and algorithms for recognizing, visualizing and generating Wheeler graphs

    [RECOMB-Seq 2023] Research on Computational Molecular Biology on Biological Sequence Analysis 2023Research in Computational Molecular Biology Conference on Biological Sequence Analysis (RECOMB-Seq 2023)· Istanbul, TürkiyeTalk

    SlidesVideo

  17. [BDS 2022] Biological Data Science 2022

    Biological Data Science (BDS 2022)· Cold Spring Harbor, New YorkPoster

    SlidesVideo

  18. [Bioc 2021] Bioconductor Conference 2021

    Bioconductor Conference 2021 (Bioc 2021)· VirtualPoster

    Slides

  19. RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

    [ICIBM 2019] International Conference on Intelligent Biology and Medicine 2019International Conference on Intelligent Biology and Medicine (ICIBM 2019)· Columbus, OhioTalk

    Slides

  20. RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

    [NTUCGM 2018] Summer Research Competition 2018NTU Centers of Genomics and Precision Medicine (NTUCGM) Summer Research· Taipei, TaiwanTalk

  21. [WCIT 2017] Exhibition on smart transportation with Taipei City Government

    World Congress on Information Technology (WCIT 2017)· Taipei, TaiwanExhibition

    SlidesVideo