Wheeler graph recognition algorithm (heuristic + SMT)

   2021-12 - 2023-08

   Baltimore, MD

   Johns Hopkins University CS + UC Berkeley EECS collaboration

   Genome assembly / indexing

   Published   iScience

     Ben Langmead      Sanjit Seshia  

  Introduction

I am developing SpliceNN, a residual-convolutional-neural-network-based deep learning model, aiming to filter out misaligned spliced reads.