Kuan-Hao Chao

KH Chao

CS Ph.D. student @ Center for Computational Biology, JHU, US

News

Jan, 2022:
My new paper in G3: Genes, Genomes, Genetics describes the first gap-free assembly of a Han Chinese human, Han1. See the paper here.

Nov, 2022:
I present Han1 at 2022 Biological Data Science! Here is the link to the poster and the video to my 1-min lightening talk.

Oct, 2022:
We are releasing WGT, the first Wheeler Graph suite with the fastest recognition algorithm. It's on bioRxiv now!

Aug, 2022:
We are releasing Han1, the first gapless, fully annotated Chinese Han genome. Check it out on bioRxiv!

Oct, 2021:
sangeranalyseR and RNASeqR are released on Bioconductor 3.14.

Sep, 2021:
I join Dr. Steven Salzberg's and Dr. Mihaela Pertea's lab as a CS Ph.D. student at JHU.

Aug, 2021:
sangeranalyseR is awarded the Best Poster at Bioc2021 >>Poster<< .

June, 2021:
Play my Unity games!

Mar, 2021:
sangeranalyseR is published on Genome Biology and Evolution.



Mihaela Pertea

   Baltimore, MD

  Department of Computer Science, Center of Computational Biology, Johns Hopkins University

 

   mpertea@jhu.edu

  

   Personal Website:  http://ccb.jhu.edu/people/mpertea/

   Publications:           https://scholar.google.com/citations?user=fKjqGyEAAAAJ&hl=en

  Introduction

CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure

Ales Varabyou, Markus J. Sommer, Beril Erdogdu, Ida Shinder, Ilia Minkin,
Kuan-Hao Chao, Sukhwan Park, Jakob Heinz, Christopher Pockrandt, Alaina Shumate, Natalia Rincon, Daniela Puiu, Martin Steinegger, Steven L. Salzberg, Mihaela Pertea (2022). CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure, bioRxiv in press, https://doi.org/10.1101/2022.12.21.521274.